scripts.data.preprocessing.cleanStructs.extractBackbone

scripts.data.preprocessing.cleanStructs.extractBackbone(filename, outpath)[source]

Given a PDB structure, extract the protein backbone atoms and dump it in a redesigned PDB file.

Parameters:
  • filename (str) – Input .pdb file

  • outpath (str) – Prefix to place the output file (.red.pdb will be appended)