scripts.data.postprocessing.to_etab

Parse output of TERMinator into .etab files for use in MST.

Usage:

python to_etab.py \
    --output_dir <folder_with_net.out> \
    --dtermen_data <dtermen_data_root> \
    --num_cores <num_processes> \
    [-u]

See python to_etab.py --help for more info.

Functions

eprint(*args, **kwargs)	Print to stderr rather than stdout
get_idx_dict(pdb[, chain_filter])	From a .red.pdb file, generate a dictionary mapping indices used within TERMinator to indices used by the .red.pdb file.
to_etab_file(etab_matrix, E_idx, idx_dict, ...)	Write an .etab file based on the fed in matrix and other indexing factors.